STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL1839S ribosomal protein L18, mitochondrial. (180 aa)    
Predicted Functional Partners:
MRPL44
Mitochondrial ribosomal protein L44.
   
 
 0.940
MRPL4
Mitochondrial ribosomal protein L4.
   
   0.924
MRPL40
39S ribosomal protein L40, mitochondrial.
   
   0.923
MRPS30
Mitochondrial ribosomal protein S30.
   
   0.920
MRPL20
Mitochondrial ribosomal protein L20.
   
   0.907
MRPS25
28S ribosomal protein S25, mitochondrial.
   
 
 0.906
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
   0.903
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.894
MRPL32
Mitochondrial ribosomal protein L32.
   
   0.889
MRPS10
Mitochondrial ribosomal protein S10.
   
 
 0.886
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.