STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN2Ataxin 2. (1306 aa)    
Predicted Functional Partners:
ITPR1
Uncharacterized protein.
     
 0.970
ATXN3L
Ataxin 3 like.
    
 0.963
ATXN3
Josephin domain-containing protein.
    
 0.958
LSM12
LSM12 homolog.
    
 
 0.953
DDX6
Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.
    
 
 0.922
ATXN2L
Ataxin-2-like protein isoform C.
  
 
0.915
ATXN1
Ataxin 1.
   
 
 0.844
TARDBP
TAR DNA-binding protein 43.
    
 
 0.835
C9orf72
C9orf72-SMCR8 complex subunit.
      
 0.785
ENSCJAP00000076803
FUS RNA binding protein.
   
 
 0.774
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.