STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP5CSerine/threonine-protein phosphatase. (499 aa)    
Predicted Functional Partners:
MAP3K5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.928
PTGES3
Prostaglandin E synthase 3.
    
 0.917
ENSCJAP00000073695
Uncharacterized protein.
    
 0.917
BRAF
Uncharacterized protein.
   
  0.853
CDC37L1
Hsp90 co-chaperone Cdc37-like 1.
    
 
 0.848
CDC37
Cell division cycle 37.
    
 
 0.848
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
   
 0.833
ENSCJAP00000068114
Uncharacterized protein.
   
 0.833
ENSCJAP00000070456
Uncharacterized protein.
   
 0.833
HSP90AA1
HATPase_c domain-containing protein.
   
 0.818
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.