STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOVA2NOVA alternative splicing regulator 2. (553 aa)    
Predicted Functional Partners:
ENSCJAP00000070769
Polypyrimidine tract binding protein 2.
    
 
 0.662
RBFOX2
RNA binding protein fox-1 homolog 2 isoform 5.
      
 0.590
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3 isoform a.
      
 0.538
SEC31A
WD_REPEATS_REGION domain-containing protein.
      
 0.525
RASSF8
Ras association domain family member 8.
      
 0.522
FAM107B
Family with sequence similarity 107 member B.
      
 0.513
HNRNPH1
Uncharacterized protein.
      
 0.503
SLU7
SLU7 homolog, splicing factor.
      
 0.472
SNRPB2
Small nuclear ribonucleoprotein polypeptide B2.
    
 
 0.470
SRSF5
Serine and arginine rich splicing factor 5.
   
 
 0.467
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.