STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB28RAB28, member RAS oncogene family. (251 aa)    
Predicted Functional Partners:
C8orf37
Chromosome 8 open reading frame 37.
      
 0.662
EXOC6B
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.661
EXOC6
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.661
CEP78
Centrosomal protein 78.
     
 0.631
PITPNM3
Membrane-associated phosphatidylinositol transfer protein 3 isoform 1.
   
  
 0.624
CFAP410
Cilia and flagella associated protein 410.
      
 0.620
DRAM2
DNA damage-regulated autophagy modulator protein 2.
      
 0.577
POC1B
POC1 centriolar protein B.
    
 0.577
RIMS1
Regulating synaptic membrane exocytosis 1.
   
 
 0.575
IFT81
Intraflagellar transport protein 81 homolog isoform 1.
      
 0.571
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.