STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFLNARefilin A. (216 aa)    
Predicted Functional Partners:
BNC2
Basonuclin 2.
      
 0.776
C17orf67
Chromosome 17 open reading frame 67.
      
 0.770
PITX1
Homeobox protein.
      
 0.690
ZIC2
Zic family member 2.
      
 0.613
POC5
POC5 centriolar protein.
      
 0.562
PPP4R4
Serine/threonine-protein phosphatase 4 regulatory subunit 4 isoform 1.
      
 0.475
DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
      
 0.443
COMP
Cartilage oligomeric matrix protein.
      
 0.430
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.