STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD54Ankyrin repeat domain-containing protein 54. (299 aa)    
Predicted Functional Partners:
TULP3
TUB like protein 3; Belongs to the TUB family.
    
 
 0.642
TXK
Tyrosine-protein kinase.
    
 0.605
BLOC1S6
Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]
    
 0.555
EPS8L1
EPS8 like 1.
     
 0.533
ANKRD26
ANK_REP_REGION domain-containing protein.
  
 
 0.530
NFKBIA
NF-kappa-B inhibitor alpha.
  
     0.506
ASB9
Ankyrin repeat and SOCS box protein 9 isoform 1.
  
     0.503
CDKN2C
Cyclin-dependent kinase 4 inhibitor C.
  
     0.500
ANKRD30A
ANK_REP_REGION domain-containing protein.
  
     0.498
MTPN
Myotrophin.
  
 
   0.485
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.