STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF41Zinc finger protein 41. (788 aa)    
Predicted Functional Partners:
ZC4H2
Uncharacterized protein.
    
 
 0.782
ZDHHC9
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.732
RBM10
RNA binding motif protein 10.
    
 
 0.621
PRDM8
PR/SET domain 8.
    
 
 0.507
CUTA
CutA divalent cation tolerance homolog.
      
 0.501
HTATSF1
HIV-1 Tat specific factor 1.
      
 0.459
ZDBF2
Zinc finger DBF-type containing 2.
      
 0.430
DLK1
Uncharacterized protein.
    
 0.422
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.