STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSR1TSR1 ribosome maturation factor. (803 aa)    
Predicted Functional Partners:
BYSL
Bystin like.
   
 0.999
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.999
LTV1
LTV1 ribosome biogenesis factor.
   
 0.998
RIOK2
RIO kinase 2.
   
 0.997
DIMT1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.995
RRP12
Ribosomal RNA processing 12 homolog.
   
 
 0.994
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.987
ENSCJAP00000077762
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.987
ENSCJAP00000078156
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.987
ENSCJAP00000078253
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.987
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.