STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPDR1Mammalian ependymin-related protein 1 isoform 1. (224 aa)    
Predicted Functional Partners:
CPED1
Cadherin like and PC-esterase domain containing 1.
      
 0.540
TSKU
Tsukushi, small leucine rich proteoglycan.
      
 0.538
CREG1
Cellular repressor of E1A stimulated genes 1; Belongs to the CREG family.
      
 0.463
TOX4
TOX high mobility group box family member 4.
      
 0.452
GKN1
Gastrokine 1.
      
 0.450
TDRP
Testis development related protein.
      
 0.447
TOR3A
Torsin family 3 member A.
      
 0.433
HEPACAM
Hepatic and glial cell adhesion molecule.
      
 0.420
ERGIC2
Endoplasmic reticulum-Golgi intermediate compartment protein 2.
   
  
 0.408
STARD3NL
MLN64 N-terminal domain homolog.
      
 0.400
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.