STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABAC1PRA1 family protein. (185 aa)    
Predicted Functional Partners:
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
   
 
 0.733
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
 
 0.733
AKAP6
A-kinase anchoring protein 6.
      
 0.551
PCLO
Piccolo presynaptic cytomatrix protein.
    
 
 0.541
IER3IP1
Immediate early response 3-interacting protein 1.
      
 0.535
SELENOS
Uncharacterized protein.
   
 
 0.522
YIPF7
Protein YIPF.
   
 
 0.522
YIPF5
Protein YIPF.
   
 
 0.522
PLG
Plasminogen; Belongs to the peptidase S1 family.
      
 0.499
RAPGEF4
Rap guanine nucleotide exchange factor 4 isoform a.
      
 0.473
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.