STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAXO1Stabilizer of axonemal microtubules 1. (477 aa)    
Predicted Functional Partners:
CEP120
Centrosomal protein of 120 kDa isoform 1.
   
 0.656
CEP162
Centrosomal protein 162.
    
 0.649
LYPD4
LY6/PLAUR domain containing 4.
   
 
 0.504
C10orf120
Chromosome 10 open reading frame 120.
      
 0.491
CCDC27
Coiled-coil domain containing 27.
      
 0.457
CBY2
Spermatid associated.
   
 0.445
TRIM42
Tripartite motif containing 42.
   
 0.436
ENSCJAP00000067149
Uncharacterized protein.
    
 0.432
ENSCJAP00000069046
J domain-containing protein.
    
 0.432
PRSS44
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.420
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.