STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPDC1Neural proliferation differentiation and control protein 1. (325 aa)    
Predicted Functional Partners:
MAPRE3
Microtubule-associated protein RP/EB family member 3.
   
  
 0.600
APLP1
Amyloid beta precursor like protein 1.
   
  
 0.600
GTF2F2
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
      
 0.576
ENOX1
Ecto-NOX disulfide-thiol exchanger 1.
      
 0.569
ACTR1A
Actin related protein 1A.
      
 0.569
TRAPPC3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
      
 0.566
SKA3
Spindle and kinetochore associated complex subunit 3.
    
 
 0.564
RETREG3
Reticulophagy regulator family member 3.
      
 0.562
F7B816_CALJA
Ig-like domain-containing protein.
    
 0.557
PPP5C
Serine/threonine-protein phosphatase.
      
 0.555
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.