STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CICCapicua transcriptional repressor. (2518 aa)    
Predicted Functional Partners:
ATXN1
Ataxin 1.
    
 
 0.933
ATXN1L
Ataxin-1-like.
    
 
 0.709
PRRC2A
Proline rich coiled-coil 2A.
   
    0.588
RBM17
RNA binding motif protein 17.
      
 0.544
ATN1
Atrophin 1.
   
  
 0.466
SIN3B
SIN3 transcription regulator family member B.
   
 
 0.443
SIN3A
SIN3 transcription regulator family member A.
   
 
 0.436
RALA
RAS like proto-oncogene A.
    
 
 0.416
PAFAH1B3
Platelet activating factor acetylhydrolase 1b catalytic subunit 3.
   
  
 0.410
ARHGAP33
Rho GTPase activating protein 33.
  
     0.404
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.