STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM24Transcription intermediary factor 1-alpha isoform a. (1050 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
 
0.705
TRIM33
E3 ubiquitin-protein ligase TRIM33 isoform alpha.
    
 
0.689
ESR1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.674
SMAD4
Mothers against decapentaplegic homolog.
   
 0.662
SMARCAD1
Uncharacterized protein.
   
 
 0.623
TRIM8
Putative E3 ubiquitin-protein ligase TRIM8.
    
 
 0.596
RXRA
Retinoid X receptor alpha.
    
 0.573
LOC100394455
Histone H3; Belongs to the histone H3 family.
    
 0.561
CDC27
Cell division cycle protein 27 homolog isoform 1.
   
  0.541
ANAPC4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
   
   0.538
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.