STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100384959Uncharacterized protein. (523 aa)    
Predicted Functional Partners:
ECM1
Extracellular matrix protein 1 isoform 1.
      
 0.682
HAVCR2
Hepatitis A virus cellular receptor 2.
    
 0.672
SLC39A13
Solute carrier family 39 member 13.
   
 
 0.672
DDX52
DExD-box helicase 52.
      
 0.665
SLC15A2
Solute carrier family 15 member 2.
   
 
 0.629
ZBTB44
Zinc finger and BTB domain containing 44.
    
 
 0.591
ZSWIM8
Zinc finger SWIM-type containing 8.
    
 
 0.587
MRPS14
Uncharacterized protein.
    
 
 0.582
H9KXP1_CALJA
Bms1-type G domain-containing protein.
   
  
 0.577
TAF9B
TATA-box binding protein associated factor 9b.
      
 0.563
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.