STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7GX25_CALJAIg-like domain-containing protein. (408 aa)    
Predicted Functional Partners:
TGFB1
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.736
F7I7U8_CALJA
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 
 0.655
CD177
UPAR/Ly6 domain-containing protein.
   
  
 0.651
ENSCJAP00000065384
Uncharacterized protein.
   
  
 0.651
ENSCJAP00000075757
Uncharacterized protein.
  
0.612
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta isoform 1.
   
 0.534
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.534
REL
REL proto-oncogene, NF-kB subunit.
   
 0.522
RELB
RELB proto-oncogene, NF-kB subunit.
   
 0.522
RELA
RELA proto-oncogene, NF-kB subunit.
   
 0.522
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.