STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIAA1549KIAA1549. (1947 aa)    
Predicted Functional Partners:
BRAF
Uncharacterized protein.
    
 0.635
ITSN2
Intersectin 2.
    
  0.632
ENSCJAP00000078263
Uncharacterized protein.
    
  0.632
WLS
Protein wntless homolog isoform 2.
    
 0.601
FAM131B
Family with sequence similarity 131 member B.
     
 0.533
RYK
Receptor like tyrosine kinase.
    
 0.469
PRPH2
Peripherin 2.
      
 0.467
PORCN
Porcupine O-acyltransferase; Belongs to the membrane-bound acyltransferase family.
    
 0.437
ITSN1
Intersectin 1.
    
 0.425
TMC3
Transmembrane channel-like protein.
    
 
 0.408
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.