STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHFRCheckpoint with forkhead and ring finger domains. (600 aa)    
Predicted Functional Partners:
APLF
Aprataxin and PNKP like factor.
      
 0.858
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.752
OS9
Protein OS-9 isoform 1.
   
 0.742
ERLEC1
Endoplasmic reticulum lectin 1 isoform 1.
   
 0.742
PARP1
Poly [ADP-ribose] polymerase.
    
 
 0.727
SPATA5L1
Spermatogenesis-associated protein 5-like protein 1.
    
 0.695
SPATA5
Spermatogenesis associated 5.
    
 0.695
VCP
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 0.695
APTX
Aprataxin.
      
 0.683
HUS1
Checkpoint protein; Belongs to the HUS1 family.
      
 0.638
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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