STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHI3L2Chitinase 3 like 2; Belongs to the glycosyl hydrolase 18 family. (390 aa)    
Predicted Functional Partners:
DENND2D
DENN domain containing 2D.
      
 0.843
COX5B
Cytochrome c oxidase subunit 5B.
   
 0.729
PIFO
Primary cilia formation.
      
 0.611
C1orf198
Chromosome 1 open reading frame 198.
   
 0.601
PTGDR2
Prostaglandin D2 receptor 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.569
CRTAM
Cytotoxic and regulatory T cell molecule.
      
 0.568
LOC100401281
Uncharacterized protein.
   
 0.565
COX5A
Uncharacterized protein.
   
 0.565
TRIR
Telomerase RNA component interacting RNase.
   
 0.543
LOC100390127
Cytochrome c oxidase subunit; Belongs to the cytochrome c oxidase subunit 6B.
   
 0.543
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.