STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SP140SP140 nuclear body protein. (748 aa)    
Predicted Functional Partners:
UBTFL1
Upstream binding transcription factor like 1.
    
 0.810
SUGCT
Succinyl-CoA:glutarate-CoA transferase.
      
 0.790
FAM91A1
Family with sequence similarity 91 member A1.
      
 0.787
PCGF5
RING-type domain-containing protein.
      
 0.774
COL24A1
Collagen type XXIV alpha 1 chain.
    
 
 0.728
SERBP1
SERPINE1 mRNA binding protein 1.
    
 
 0.724
PAPSS2
3'-phosphoadenosine 5'-phosphosulfate synthase 2.
     
 0.715
DPRX
Divergent-paired related homeobox.
    
 
 0.642
RRN3
RNA polymerase I-specific transcription initiation factor RRN3.
      
 0.614
CRYM
Crystallin mu.
      
 0.562
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.