STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF12PHD finger protein 12 isoform 1. (1003 aa)    
Predicted Functional Partners:
MORF4L1
MRG domain-containing protein.
    
 0.933
ARID4A
AT-rich interactive domain-containing protein 4A isoform I.
    
 
 0.927
ARID4B
AT-rich interaction domain 4B.
    
 
 0.927
SIN3A
SIN3 transcription regulator family member A.
   
 0.924
GATAD1
GATA zinc finger domain-containing protein 1.
    
 
 0.909
MORF4L2
Mortality factor 4-like protein 2.
    
 
 0.900
SIN3B
SIN3 transcription regulator family member B.
   
 
 0.886
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 
 0.860
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 
 0.860
KDM5A
Lysine demethylase 5A.
    
 
 0.858
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.