STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLGALT1Collagen beta(1-O)galactosyltransferase 1. (622 aa)    
Predicted Functional Partners:
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
0.974
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
0.958
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform 1.
   
0.951
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
  
 
0.936
P3H4
Prolyl 3-hydroxylase family member 4 (non-enzymatic).
      
 0.728
P3H2
Prolyl 3-hydroxylase 2.
   
  
 0.694
HAS3
Hyaluronan synthase 3 isoform a.
      
 0.620
FKBP10
Peptidylprolyl isomerase.
   
  
 0.588
COL6A2
Uncharacterized protein.
   
 0.585
COL6A6
Collagen type VI alpha 6 chain.
    
 0.575
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.