STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCHS1Dachsous cadherin-related 1. (3297 aa)    
Predicted Functional Partners:
DCHS2
Dachsous cadherin-related 2.
  
  
 
0.902
ARFGEF2
ADP ribosylation factor guanine nucleotide exchange factor 2.
   
  
 0.758
JUP
Junction plakoglobin.
    
 0.655
CTNNB1
Catenin beta 1.
    
 0.655
CDHR5
Cadherin related family member 5.
   
 0.610
PCDH15
Protocadherin related 15.
   
0.610
CTNNA3
Catenin alpha 3.
    
 0.584
ARVCF
ARVCF delta catenin family member.
   
 0.578
FAT4
FAT atypical cadherin 4.
   
  
0.540
USH1C
USH1 protein network component harmonin.
   
 
 0.530
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.