STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAK4Non-specific serine/threonine protein kinase. (593 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42 homolog isoform 1.
   
 0.985
ARHGEF6
Rac/Cdc42 guanine nucleotide exchange factor 6.
    
 0.969
ARHGEF7
Uncharacterized protein.
    
 0.969
RAC3
Ras-related C3 botulinum toxin substrate 3.
   
 0.964
NCK1
Cytoplasmic protein.
    
 0.954
NCK2
Cytoplasmic protein.
    
 0.954
LIMK1
LIM domain kinase 1 isoform 1.
    
0.951
LIMK2
LIM domain kinase 2 isoform 2a.
    
0.947
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
    
0.942
ITSN2
Intersectin 2.
    
 0.936
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.