STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB8ARas-related protein Rab-8A. (207 aa)    
Predicted Functional Partners:
RAB8B
RAB8B, member RAS oncogene family.
  
 
0.955
TBC1D1-2
Uncharacterized protein.
    
 0.954
RAB3IP
RAB3A interacting protein.
    
 0.934
MICALL2
MICAL like 2.
    
 0.930
SLC2A4
Solute carrier family 2, facilitated glucose transporter member 4; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 0.929
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.927
SMCR8
Smith-Magenis syndrome chromosomal region candidate gene 8 protein.
    
 0.925
WDR41
WD repeat-containing protein 41.
     
 0.922
RAB39B
RAB39B, member RAS oncogene family (Predicted).
  
 
0.914
SQSTM1
Sequestosome-1 isoform 1.
    
 0.911
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.