STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD17Ankyrin repeat domain 17. (2603 aa)    
Predicted Functional Partners:
MAP3K2
Mitogen-activated protein kinase kinase kinase 2.
   
 0.745
RNF146
E3 ubiquitin-protein ligase RNF146 isoform b.
    
 0.719
SNX10
Sorting nexin-10 isoform 1.
    
 
 0.712
AXIN1
Axin-1 isoform a.
    
 0.678
AXIN2
Axin-2.
    
 0.678
ZBTB24
Zinc finger and BTB domain-containing protein 24 isoform 1.
    
 0.647
SH3GLB1
SH3 domain containing GRB2 like, endophilin B1.
    
 0.639
RASSF6
Ras association domain family member 6.
      
 0.625
TXLNA
Alpha-taxilin.
    
 
 0.619
HUWE1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
   
 
 0.608
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.