STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH2D4ASH2 domain containing 4A. (454 aa)    
Predicted Functional Partners:
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.705
CCDC15
Coiled-coil domain containing 15.
      
 0.552
AUTS2
Autism susceptibility gene 2 protein isoform 1.
      
 0.521
MTHFSD
Methenyltetrahydrofolate synthase domain-containing protein isoform 4.
      
 0.516
PPP1R7
Protein phosphatase 1 regulatory subunit 7.
    
 
 0.480
IFI30
IFI30 lysosomal thiol reductase.
      
 0.478
ABLIM3
Uncharacterized protein.
      
 0.468
SPATC1
Spermatogenesis and centriole associated 1.
      
 0.465
SCMH1
Polycomb protein SCMH1 isoform a.
      
 0.404
SCML2
Scm polycomb group protein like 2.
      
 0.404
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.