STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3BP4SH3 domain-binding protein 4. (963 aa)    
Predicted Functional Partners:
TMEM82
Transmembrane protein 82.
      
 0.577
SPATA3
Spermatogenesis associated 3.
   
  
 0.562
RRAGB
Ras-related GTP-binding protein B long isoform.
     
 0.541
NTAN1
N-terminal asparagine amidase.
      
 0.526
EPS15
Epidermal growth factor receptor substrate 15 isoform A.
   
 
 0.507
CEP78
Centrosomal protein 78.
   
  
 0.476
GJB2
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
  
     0.473
NXPH1
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
    0.466
GIPC2
PDZ domain-containing protein GIPC2.
   
   0.466
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
     
 0.449
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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