STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTP4Receptor transporter protein 4. (245 aa)    
Predicted Functional Partners:
IRF7
Interferon regulatory factor 7 isoform a.
   
  
 0.789
RSAD2
Radical S-adenosyl methionine domain-containing protein 2.
   
  
 0.772
ISG15
ISG15 ubiquitin like modifier.
   
  
 0.767
IFIH1
Interferon induced with helicase C domain 1.
   
  
 0.760
RNF213
Ring finger protein 213.
   
  
 0.743
OASL
2'-5'-oligoadenylate synthetase like.
   
  
 0.743
DDX58
Putative ATP-dependent RNA helicase DDX58.
   
  
 0.741
ENSCJAP00000071754
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  
 0.740
ENSCJAP00000074575
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  
 0.740
PARP15
Poly [ADP-ribose] polymerase.
   
  
 0.733
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.