STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7IDT1_CALJAUncharacterized protein; Belongs to the BI1 family. (285 aa)    
Predicted Functional Partners:
ZNF19
Zinc finger protein 19.
      
 0.644
LEMD3
Inner nuclear membrane protein Man1 isoform 1.
      
 0.552
PML
Promyelocytic leukemia.
    
 
 0.552
SIGMAR1
Sigma non-opioid intracellular receptor 1 isoform 1.
      
 0.532
TMEM147
Transmembrane protein 147 isoform 1.
   
  
 0.504
ZNF23
Zinc finger protein 23.
      
 0.501
DDX58
Putative ATP-dependent RNA helicase DDX58.
      
 0.493
RCN2
Reticulocalbin-2 isoform a.
      
 0.478
TMEM97
Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins.
      
 0.469
ENSCJAP00000068083
Uncharacterized protein.
   
  
 0.466
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.