STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTROBCentrobin, centriole duplication and spindle assembly protein. (925 aa)    
Predicted Functional Partners:
HAUS8
HAUS augmin like complex subunit 8.
     
 0.716
HAUS5
HAUS augmin-like complex subunit 5.
     
 0.698
CEP55
Centrosomal protein 55.
    
 
 0.582
PLK4
Serine/threonine-protein kinase PLK4 isoform 1.
   
 0.571
NIN
Ninein.
    
 
 0.570
CLASP2
Uncharacterized protein.
      
 0.566
CLASP1
Cytoplasmic linker associated protein 1.
      
 0.562
ARHGAP28
Rho GTPase activating protein 28.
      
 0.543
SYDE1
Synapse defective Rho GTPase homolog 1.
    
 
 0.542
PLK1
Serine/threonine-protein kinase PLK.
   
 0.531
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.