STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHKBP1SH3KBP1-binding protein 1. (704 aa)    
Predicted Functional Partners:
KCTD19
Potassium channel tetramerization domain containing 19.
    
 
 0.668
PACRGL
PACRG-like protein isoform 3.
      
 0.532
KCTD3
Potassium channel tetramerization domain containing 3.
  
 
  
0.505
KCTD11
Potassium channel tetramerization domain containing 11.
    
 
0.489
BTBD10
BTB domain containing 10.
      
 0.481
ZIC4
Zinc finger protein ZIC 4 isoform 1.
      
 0.459
ZNF177
Zinc finger protein 177 isoform a.
      
 0.445
ATP8B4
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.426
DENND2A
DENN domain-containing protein 2A.
      
 0.424
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.