STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASKIN1CASK interacting protein 1. (1432 aa)    
Predicted Functional Partners:
CASK
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.843
DOC2A
Double C2-like domain-containing protein.
   
  
 0.730
STXBP5
Syntaxin binding protein 5.
   
  
 0.725
CEP350
Centrosomal protein 350.
   
 
 0.640
MPP1
55 kDa erythrocyte membrane protein isoform 1; Belongs to the MAGUK family.
   
 0.639
FREM1
FRAS1 related extracellular matrix 1.
   
  0.612
FREM3
FRAS1 related extracellular matrix 3.
   
  0.612
UNC13A
C2 domain-containing protein.
   
  
 0.602
RIMS1
Regulating synaptic membrane exocytosis 1.
   
  
 0.601
NRXN1
Neurexin 1.
   
 0.601
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.