RIC8B protein (Callithrix jacchus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

RIC8B

Uncharacterized protein. (560 aa)

Predicted Functional Partners:

RTP1

0.814

RTP2

0.806

ALDH18A1

0.646

GNAL

0.635

CNGA4

0.631

CNGA2

0.624

RABIF

0.622

STOML3

0.620

ARL3

0.620

OR11H7

0.615

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALDH18A1	RIC8B	ENSCJAP00000029812	ENSCJAP00000027799	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Uncharacterized protein.	0.646
ARL3	CNGA2	ENSCJAP00000065045	ENSCJAP00000007061	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Cyclic nucleotide gated channel subunit alpha 2.	0.408
ARL3	CNGA4	ENSCJAP00000065045	ENSCJAP00000026361	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Cyclic nucleotide gated channel subunit alpha 4.	0.459
ARL3	RABIF	ENSCJAP00000065045	ENSCJAP00000062938	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Guanine nucleotide exchange factor MSS4.	0.506
ARL3	RIC8B	ENSCJAP00000065045	ENSCJAP00000027799	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.620
ARL3	STOML3	ENSCJAP00000065045	ENSCJAP00000032992	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Stomatin like 3.	0.734
CNGA2	ARL3	ENSCJAP00000007061	ENSCJAP00000065045	Cyclic nucleotide gated channel subunit alpha 2.	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	0.408
CNGA2	CNGA4	ENSCJAP00000007061	ENSCJAP00000026361	Cyclic nucleotide gated channel subunit alpha 2.	Cyclic nucleotide gated channel subunit alpha 4.	0.988
CNGA2	GNAL	ENSCJAP00000007061	ENSCJAP00000008674	Cyclic nucleotide gated channel subunit alpha 2.	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform 1.	0.602
CNGA2	RIC8B	ENSCJAP00000007061	ENSCJAP00000027799	Cyclic nucleotide gated channel subunit alpha 2.	Uncharacterized protein.	0.624
CNGA2	RTP1	ENSCJAP00000007061	ENSCJAP00000078193	Cyclic nucleotide gated channel subunit alpha 2.	zf-3CxxC domain-containing protein.	0.541
CNGA2	RTP2	ENSCJAP00000007061	ENSCJAP00000026500	Cyclic nucleotide gated channel subunit alpha 2.	Receptor transporter protein 2.	0.426
CNGA2	STOML3	ENSCJAP00000007061	ENSCJAP00000032992	Cyclic nucleotide gated channel subunit alpha 2.	Stomatin like 3.	0.629
CNGA4	ARL3	ENSCJAP00000026361	ENSCJAP00000065045	Cyclic nucleotide gated channel subunit alpha 4.	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	0.459
CNGA4	CNGA2	ENSCJAP00000026361	ENSCJAP00000007061	Cyclic nucleotide gated channel subunit alpha 4.	Cyclic nucleotide gated channel subunit alpha 2.	0.988
CNGA4	RIC8B	ENSCJAP00000026361	ENSCJAP00000027799	Cyclic nucleotide gated channel subunit alpha 4.	Uncharacterized protein.	0.631
CNGA4	RTP1	ENSCJAP00000026361	ENSCJAP00000078193	Cyclic nucleotide gated channel subunit alpha 4.	zf-3CxxC domain-containing protein.	0.513
CNGA4	RTP2	ENSCJAP00000026361	ENSCJAP00000026500	Cyclic nucleotide gated channel subunit alpha 4.	Receptor transporter protein 2.	0.618
CNGA4	STOML3	ENSCJAP00000026361	ENSCJAP00000032992	Cyclic nucleotide gated channel subunit alpha 4.	Stomatin like 3.	0.690
GNAL	CNGA2	ENSCJAP00000008674	ENSCJAP00000007061	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform 1.	Cyclic nucleotide gated channel subunit alpha 2.	0.602