STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB6EF-hand calcium binding domain 6. (1502 aa)    
Predicted Functional Partners:
C19orf71
Chromosome 19 open reading frame 71.
    
 
 0.779
TEKT4
Tektin 4.
   
 
 0.738
EFHC2
EF-hand domain-containing family member C2.
    
 
 0.734
DNAI1
Dynein axonemal intermediate chain 1.
   
 0.732
TEKT3
Tektin 3.
   
 
 0.718
RIBC2
RIB43A domain with coiled-coils 2.
   
 
 0.716
TEKT2
Tektin-2.
   
 
 0.691
TEKT1
Tektin-1.
   
 
 0.683
DNAH10
Dynein axonemal heavy chain 10.
   
 0.671
EFHC1
EF-hand domain-containing protein 1 isoform 1.
    
 
 0.670
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.