STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3BP1Ras GTPase-activating protein-binding protein 1. (466 aa)    
Predicted Functional Partners:
CAPRIN1
Cell cycle associated protein 1.
   
 
 0.992
USP10
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 
 0.933
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
   
 
 0.909
G3BP2
Ras GTPase-activating protein-binding protein 2 isoform a.
  
 
 
0.881
NUFIP2
Nuclear fragile X mental retardation-interacting protein 2.
    
 
 0.777
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.764
ATXN2
Ataxin 2.
   
 
 0.744
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 
 0.741
YBX1
Nuclease-sensitive element-binding protein 1.
   
 
 0.738
EIF4E
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
   
 
 0.738
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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