STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SREK1IP1SREK1 interacting protein 1. (168 aa)    
Predicted Functional Partners:
SREK1
Uncharacterized protein.
      
 0.534
CREG2
Cellular repressor of E1A stimulated genes 2; Belongs to the CREG family.
      
 0.521
ZNF572
Zinc finger protein 572.
      
 0.516
WIPF1
WAS/WASL-interacting protein family member 1.
      
 0.468
LEMD3
Inner nuclear membrane protein Man1 isoform 1.
      
 0.467
SFXN3
Sidoreflexin.
      
 0.447
SMIM15
Small integral membrane protein 15.
      
 0.400
ENSCJAP00000077516
Uncharacterized protein.
      
 0.400
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.