STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWC27CWC27 spliceosome associated cyclophilin. (472 aa)    
Predicted Functional Partners:
CWC22
MIF4G domain-containing protein.
   
 0.989
CDC5L
Cell division cycle 5-like protein.
   
 
 0.983
RNF113A
RING finger protein 113A.
   
 0.983
DHX16
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform 1.
   
 0.976
PRPF19
Pre-mRNA-processing factor 19.
    
 0.975
CDC40
Cell division cycle 40.
    
 0.963
SF3A3
Splicing factor 3A subunit 3.
   
 0.948
BUD31
BUD31 homolog.
   
 0.943
PRPF8
Pre-mRNA-processing-splicing factor 8.
   
 0.942
BUD13
BUD13 homolog.
    
 0.941
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.