STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF2L1Stromal cell-derived factor 2-like protein 1. (221 aa)    
Predicted Functional Partners:
DNAJB11
J domain-containing protein.
   
 0.867
CRELD2
Cysteine rich with EGF like domains 2.
   
 
 0.849
SNX5
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 
 0.800
ENSCJAP00000076647
PX domain-containing protein.
   
 
 0.800
DNAJC10
DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.
   
 0.786
MANF
Mesencephalic astrocyte derived neurotrophic factor.
   
  
 0.743
MYDGF
Myeloid derived growth factor.
   
  
 0.742
HSP90B1
HATPase_c domain-containing protein.
   
 
 0.740
HYOU1
Hypoxia up-regulated 1.
   
 0.714
HSPA5
78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.697
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.