STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUS2tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform 1. (493 aa)    
Predicted Functional Partners:
EPRS1
Uncharacterized protein.
  
 
 0.973
DDX28
DEAD-box helicase 28.
   
 
 0.747
DRG2
Developmentally-regulated GTP-binding protein 2.
   
  
 0.609
ATPAF2
ATP synthase mitochondrial F1 complex assembly factor 2.
   
  
 0.578
COQ10B
Coenzyme Q-binding protein COQ10 homolog B, mitochondrial.
     
 0.569
TMTC1
Transmembrane O-mannosyltransferase targeting cadherins 1.
   
  
 0.566
EFHD1
Uncharacterized protein.
      
 0.564
LOC100385103
10 kDa heat shock protein, mitochondrial; Belongs to the GroES chaperonin family.
      
 0.561
THUMPD1
THUMP domain containing 1.
   
 
 0.560
PUS3
Pseudouridine synthase 3.
  
 
 0.536
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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