STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD3THUMP domain containing 3. (506 aa)    
Predicted Functional Partners:
SETD5
SET domain containing 5.
 
    
 0.898
ITSN2
Intersectin 2.
   
 0.863
ENSCJAP00000078263
Uncharacterized protein.
   
 0.863
LHFPL4
Lipoma HMGIC fusion partner-like 4 protein.
      
 0.846
ITSN1
Intersectin 1.
   
 0.711
WAS
WASP actin nucleation promoting factor.
   
 0.624
WASL
WASP like actin nucleation promoting factor.
   
 0.624
GAS7
Growth arrest-specific protein 7 isoform c.
   
 0.609
TRMT112
tRNA methyltransferase subunit 11-2.
    
 
 0.509
NCKIPSD
NCK interacting protein with SH3 domain.
    
 
 0.503
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.