STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSKH1Serine/threonine-protein kinase H1; Belongs to the protein kinase superfamily. (424 aa)    
Predicted Functional Partners:
DCX
Doublecortin.
 
  
 
 0.878
MPP1
55 kDa erythrocyte membrane protein isoform 1; Belongs to the MAGUK family.
 
 
 0.623
TMEM129
Transmembrane protein 129.
   
    0.550
CALM2
Calmodulin 2; Belongs to the calmodulin family.
   
 0.500
EFCAB3
EF-hand calcium binding domain 3.
   
 0.500
EFCAB13
EF-hand calcium binding domain 13.
   
 0.500
ENSCJAP00000056640
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.500
CALML5
Calmodulin-like protein 5.
   
 0.500
CALM1
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.500
CALML3
Calmodulin-like protein 3; Belongs to the calmodulin family.
   
 0.500
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.