STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF17BCMA-Tall_bind domain-containing protein. (183 aa)    
Predicted Functional Partners:
TNFSF13B
Tumor necrosis factor ligand 7A; Belongs to the tumor necrosis factor family.
    
 0.991
TNFSF13
Tumor necrosis factor ligand superfamily member 13 isoform alpha proprotein; Belongs to the tumor necrosis factor family.
    
 0.961
MZB1
Marginal zone B and B1 cell specific protein.
   
  
 0.828
TNFRSF13B
TNF receptor superfamily member 13B.
   
  
 0.809
POU2AF1
POU class 2 homeobox associating factor 1.
   
  
 0.740
JCHAIN
Uncharacterized protein.
   
  
 0.589
EIF2AK4
Eukaryotic translation initiation factor 2-alpha kinase 4.
      
 0.477
ENSCJAP00000055129
Ig-like domain-containing protein.
    
   0.470
ENSCJAP00000076026
Ig-like domain-containing protein.
    
   0.470
ATF6B
Cyclic AMP-dependent transcription factor ATF-6 beta isoform a.
      
 0.465
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.