STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRPK2SRSF protein kinase 2 isoform a. (698 aa)    
Predicted Functional Partners:
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.814
CDC5L
Cell division cycle 5-like protein.
    
 
 0.758
PGBD1
PiggyBac transposable element-derived protein 1.
    
 
 0.736
PRPF38A
Pre-mRNA processing factor 38A.
   
 
 0.712
RBM39
RNA binding motif protein 39.
    
 
 0.705
SRSF4
Serine and arginine rich splicing factor 4.
   
 
 0.703
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
    
 
 0.694
SRSF5
Serine and arginine rich splicing factor 5.
   
 
 0.691
SRSF6
Serine/arginine-rich splicing factor 6.
   
 
 0.684
DDX46
DEAD-box helicase 46.
   
 
 0.678
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.