STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRFN5Leucine-rich repeat and fibronectin type-III domain-containing protein 5. (719 aa)    
Predicted Functional Partners:
NUDC
Nuclear distribution C, dynein complex regulator.
     
 0.788
DLG2
Discs large MAGUK scaffold protein 2.
    
 0.718
ANTXR2
Anthrax toxin receptor; Belongs to the ATR family.
    
 0.713
CA7
Carbonic anhydrase 7 isoform 1; Belongs to the alpha-carbonic anhydrase family.
   
  
 0.699
WDFY3
WD repeat and FYVE domain containing 3.
      
 0.690
CLTC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.671
CTNND2
Catenin delta-2.
    
 0.627
TJP2
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.627
CMYA5
Cardiomyopathy associated 5.
    
 0.612
TRAPPC6B
Trafficking protein particle complex subunit 6B isoform 1.
   
  
 0.607
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.