STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMBNeuromedin B. (155 aa)    
Predicted Functional Partners:
NMBR
Neuromedin B receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.997
GRPR
Gastrin releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.990
BRS3
Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.
    
 0.988
GRP
Gastrin releasing peptide.
     
 0.971
ELP3
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.921
ELP1
Elongator complex protein 1.
    
 
 0.857
ELP5
Elongator acetyltransferase complex subunit 5.
   
 
 0.844
SGCE
Sarcoglycan epsilon.
     
 0.821
SGCA
Sarcoglycan alpha.
     
 0.821
ATF3
Cyclic AMP-dependent transcription factor ATF-3 isoform 1.
      
 0.732
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.