STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT2Zinc finger matrin-type protein 2. (199 aa)    
Predicted Functional Partners:
MFAP1
Microfibrillar-associated protein 1 (Predicted).
   
 0.931
PRPF38A
Pre-mRNA processing factor 38A.
   
 0.916
PRPF6
Pre-mRNA-processing factor 6.
   
 0.911
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.871
PRPF31
PRP31 pre-mRNA processing factor 31 homolog (Predicted).
   
 0.836
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3.
   
 0.829
SF3A2
Splicing factor 3A subunit 2.
   
 
 0.827
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
    
 0.820
LSM6
U6 snRNA-associated Sm-like protein LSm6.
   
 0.818
TCERG1
Transcription elongation regulator 1.
    
  0.816
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.