STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBMS2RNA-binding motif, single-stranded-interacting protein 2. (407 aa)    
Predicted Functional Partners:
LRRC47
Leucine rich repeat containing 47.
      
 0.815
C1orf54
Chromosome 1 open reading frame 54.
      
 0.814
SUCLG2
Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial; GTP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
      
 0.770
MAD1L1
Mitotic arrest deficient 1 like 1.
      
 0.714
LRPAP1
Alpha-2-macroglobulin receptor-associated protein.
      
 0.617
TMEM59L
Transmembrane protein 59 like.
      
 0.581
TOR4A
Torsin family 4 member A.
      
 0.581
AURKC
Aurora kinase C isoform 1; Belongs to the protein kinase superfamily.
      
 0.570
ZNF385A
Zinc finger protein 385A.
    
 
 0.564
NPY1R
Neuropeptide Y receptor type 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.563
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.