SLIRP protein (Callithrix jacchus) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SLIRP

SRA stem-loop interacting RNA binding protein. (124 aa)

Predicted Functional Partners:

LRPPRC

0.961

MTERF3

0.813

GRSF1

0.779

ERAL1

0.728

PTCD3

0.719

MRPL11

0.701

NDUFC1

0.677

MRPS22

0.640

MRPL36

0.616

MRPL19

0.605

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERAL1	GRSF1	ENSCJAP00000067116	ENSCJAP00000026657	Era like 12S mitochondrial rRNA chaperone 1.	G-rich RNA sequence binding factor 1.	0.631
ERAL1	LRPPRC	ENSCJAP00000067116	ENSCJAP00000001418	Era like 12S mitochondrial rRNA chaperone 1.	Leucine rich pentatricopeptide repeat containing.	0.635
ERAL1	MRPL11	ENSCJAP00000067116	ENSCJAP00000002631	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	0.507
ERAL1	MRPL19	ENSCJAP00000067116	ENSCJAP00000063307	Era like 12S mitochondrial rRNA chaperone 1.	39S ribosomal protein L19, mitochondrial.	0.465
ERAL1	MRPL36	ENSCJAP00000067116	ENSCJAP00000062868	Era like 12S mitochondrial rRNA chaperone 1.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.492
ERAL1	MRPS22	ENSCJAP00000067116	ENSCJAP00000074555	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein S22.	0.992
ERAL1	MTERF3	ENSCJAP00000067116	ENSCJAP00000038204	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial transcription termination factor 3.	0.778
ERAL1	PTCD3	ENSCJAP00000067116	ENSCJAP00000036298	Era like 12S mitochondrial rRNA chaperone 1.	Pentatricopeptide repeat-containing protein 3, mitochondrial.	0.989
ERAL1	SLIRP	ENSCJAP00000067116	ENSCJAP00000052809	Era like 12S mitochondrial rRNA chaperone 1.	SRA stem-loop interacting RNA binding protein.	0.728
GRSF1	ERAL1	ENSCJAP00000026657	ENSCJAP00000067116	G-rich RNA sequence binding factor 1.	Era like 12S mitochondrial rRNA chaperone 1.	0.631
GRSF1	LRPPRC	ENSCJAP00000026657	ENSCJAP00000001418	G-rich RNA sequence binding factor 1.	Leucine rich pentatricopeptide repeat containing.	0.602
GRSF1	MRPL11	ENSCJAP00000026657	ENSCJAP00000002631	G-rich RNA sequence binding factor 1.	Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	0.476
GRSF1	MRPL19	ENSCJAP00000026657	ENSCJAP00000063307	G-rich RNA sequence binding factor 1.	39S ribosomal protein L19, mitochondrial.	0.453
GRSF1	MRPL36	ENSCJAP00000026657	ENSCJAP00000062868	G-rich RNA sequence binding factor 1.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.770
GRSF1	MRPS22	ENSCJAP00000026657	ENSCJAP00000074555	G-rich RNA sequence binding factor 1.	Mitochondrial ribosomal protein S22.	0.527
GRSF1	MTERF3	ENSCJAP00000026657	ENSCJAP00000038204	G-rich RNA sequence binding factor 1.	Mitochondrial transcription termination factor 3.	0.773
GRSF1	PTCD3	ENSCJAP00000026657	ENSCJAP00000036298	G-rich RNA sequence binding factor 1.	Pentatricopeptide repeat-containing protein 3, mitochondrial.	0.653
GRSF1	SLIRP	ENSCJAP00000026657	ENSCJAP00000052809	G-rich RNA sequence binding factor 1.	SRA stem-loop interacting RNA binding protein.	0.779
LRPPRC	ERAL1	ENSCJAP00000001418	ENSCJAP00000067116	Leucine rich pentatricopeptide repeat containing.	Era like 12S mitochondrial rRNA chaperone 1.	0.635
LRPPRC	GRSF1	ENSCJAP00000001418	ENSCJAP00000026657	Leucine rich pentatricopeptide repeat containing.	G-rich RNA sequence binding factor 1.	0.602